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	1. 5661 Accesses	Review Using graph theory to analyze biological networks Georgios A Pavlopoulos, Maria Secrier, Charalampos N Moschopoulos, Theodoros G Soldatos, Sophia Kossida, Jan Aerts, Reinhard Schneider, Pantelis G Bagos BioData Mining 2011, 4:10 (28 April 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	2. 3299 Accesses	Research Comprehensive analysis of human microRNA target networks Jun-ichi Satoh, Hiroko Tabunoki BioData Mining 2011, 4:17 (17 June 2011) Abstract \| Full text \| PDF \| PubMed
	3. 3273 Accesses	Review A survey of visualization tools for biological network analysis Georgios A Pavlopoulos, Anna-Lynn Wegener, Reinhard Schneider BioData Mining 2008, 1:12 (28 November 2008) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	4. 2690 Accesses	Research Partitioning clustering algorithms for protein sequence data sets Sondes Fayech, Nadia Essoussi, Mohamed Limam BioData Mining 2009, 2:3 (2 April 2009) Abstract \| Full text \| PDF \| PubMed
	5. 2567 Accesses	Review A reference guide for tree analysis and visualization Georgios A Pavlopoulos, Theodoros G Soldatos, Adriano Barbosa-Silva, Reinhard Schneider BioData Mining 2010, 3:1 (22 February 2010) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	6. 2396 Accesses	Methodology Alignment of gene expression profiles from test samples against a reference database: New method for context-specific interpretation of microarray data Sami K Kilpinen, Kalle A Ojala, Olli P Kallioniemi BioData Mining 2011, 4:5 (31 March 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	7. 2390 Accesses	Research Search extension transforms Wiki into a relational system: A case for flavonoid metabolite database Masanori Arita, Kazuhiro Suwa BioData Mining 2008, 1:7 (17 September 2008) Abstract \| Full text \| PDF \| PubMed
	8. 2301 Accesses	Software article Fast Gene Ontology based clustering for microarray experiments Kristian Ovaska, Marko Laakso, Sampsa Hautaniemi BioData Mining 2008, 1:11 (21 November 2008) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	9. 2276 Accesses	Methodology Grammatical evolution decision trees for detecting gene-gene interactions Alison A Motsinger-Reif, Sushamna Deodhar, Stacey J Winham, Nicholas E Hardison BioData Mining 2010, 3:8 (18 November 2010) Abstract \| Full text \| PDF \| PubMed
	10. 2005 Accesses	Review A review of estimation of distribution algorithms in bioinformatics Rubén Armañanzas, Iñaki Inza, Roberto Santana, Yvan Saeys, Jose Flores, Jose Lozano, Yves Peer, Rosa Blanco, Víctor Robles, Concha Bielza, Pedro Larrañaga BioData Mining 2008, 1:6 (11 September 2008) Abstract \| Full text \| PDF \| PubMed
	11. 1992 Accesses	Research A comparison of machine learning techniques for survival prediction in breast cancer Leonardo Vanneschi, Antonella Farinaccio, Giancarlo Mauri, Mauro Antoniotti, Paolo Provero, Mario Giacobini BioData Mining 2011, 4:12 (11 May 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	12. 1879 Accesses	Research Detection of changes in gene regulatory patterns, elicited by perturbations of the Hsp90 molecular chaperone complex, by visualizing multiple experiments with an animation Pablo C Echeverría, Fedor Forafonov, Deo P Pandey, Guillaume Mühlebach, Didier Picard BioData Mining 2011, 4:15 (14 June 2011) Abstract \| Full text \| PDF \| PubMed
	13. 1866 Accesses	Research Rule based classifier for the analysis of gene-gene and gene-environment interactions in genetic association studies Thorsten Lehr, Jing Yuan, Dirk Zeumer, Supriya Jayadev, Marylyn D Ritchie BioData Mining 2011, 4:4 (1 March 2011) Abstract \| Full text \| PDF \| PubMed
	14. 1830 Accesses	Research Fast approximate hierarchical clustering using similarity heuristics Meelis Kull, Jaak Vilo BioData Mining 2008, 1:9 (22 September 2008) Abstract \| Full text \| PDF \| PubMed
	15. 1803 Accesses	Research Database mining for selection of SNP markers useful in admixture mapping Tesfaye M Baye, Hemant K Tiwari, David B Allison, Rodney C Go BioData Mining 2009, 2:1 (14 February 2009) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	16. 1796 Accesses	Editorial Mining the diseasome Davnah Urbach, Jason H Moore BioData Mining 2011, 4:25 (9 September 2011) Abstract \| Full text \| PDF \| PubMed
	17. 1759 Accesses	Research Biclustering of Gene Expression Data by Correlation-Based Scatter Search Juan A Nepomuceno, Alicia Troncoso, Jesús S Aguilar-Ruiz BioData Mining 2011, 4:3 (24 January 2011) Abstract \| Full text \| PDF \| PubMed
	18. 1733 Accesses	Editorial Data mining and the evolution of biological complexity Davnah Urbach, Jason H Moore BioData Mining 2011, 4:7 (10 April 2011) Abstract \| Full text \| PDF \| PubMed
	19. 1662 Accesses	Research Mining tissue specificity, gene connectivity and disease association to reveal a set of genes that modify the action of disease causing genes Antonio Reverter, Aaron Ingham, Brian P Dalrymple BioData Mining 2008, 1:8 (19 September 2008) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Editor’s summary A new algorithm, which mines databases of tissue specificity, gene connectivity and disease association, has identified a new group of genes that interact with disease causing genes and impact on disease outcomes.
	20. 1622 Accesses	Research DADA: Degree-Aware Algorithms for Network-Based Disease Gene Prioritization Sinan Erten, Gurkan Bebek, Rob M Ewing, Mehmet Koyutürk BioData Mining 2011, 4:19 (24 June 2011) Abstract \| Full text \| PDF \| PubMed
	21. 1598 Accesses	Research Large scale analysis of positional effects of single-base mismatches on microarray gene expression data Fenghai Duan, Mark A Pauley, Eliot R Spindel, Li Zhang, Robert B Norgren BioData Mining 2010, 3:2 (29 April 2010) Abstract \| Full text \| PDF \| PubMed
	22. 1594 Accesses	Software article An R package implementation of multifactor dimensionality reduction Stacey J Winham, Alison A Motsinger-Reif BioData Mining 2011, 4:24 (16 August 2011) Abstract \| Full text \| PDF \| PubMed
	23. 1508 Accesses	Editorial The spatial dimension in biological data mining Davnah Urbach, Jason H Moore BioData Mining 2011, 4:6 (10 April 2011) Abstract \| Full text \| PDF \| PubMed
	24. 1503 Accesses	Research 3PFDB - A database of Best Representative PSSM Profiles (BRPs) of Protein Families generated using a novel data mining approach Khader Shameer, Paramasivam Nagarajan, Kumar Gaurav, Ramanathan Sowdhamini BioData Mining 2009, 2:8 (4 December 2009) Abstract \| Full text \| PDF \| PubMed
	25. 1501 Accesses	Methodology Preprocessing differential methylation hybridization microarray data Shuying Sun, Yi-Wen Huang, Pearlly S Yan, Tim HM Huang, Shili Lin BioData Mining 2011, 4:13 (16 May 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central