Table 1

Glossary of Statistical Genetics Terms

Term
Definition

Allele
One member of a series of different forms of a gene
Association study
The use of case-control, cohort, or even family data to statistically relate genetic variations to a disease/phenotype
Chromosome
A singular, physical piece of DNA, which can contain many genes and regulatory elements
Epistasis
Gene-gene interaction; as a deviation from additivity in the effect of alleles at different loci with respect to their contribution to a phenotype
Gene
A heritable unit; a region of genomic sequence which is associated with regulatory, transcribed, and/or other functional regions
Genotype
Specific allele combinations for an individual
Genotyping
The experimental determination of sequence variations
Linkage study
The use of genotype and phenotype information from multiple biologically-related family members to determine whether a chromosomal region is preferentially inherited by offspring with the trait of interest
Locus
A fixed position on a chromosome
Mendelian disease
A genetic disease that is caused by a single locus, and displays a pattern of inheritance in line with Mendel's Laws
Phenotype
A measurable trait for an individual
Pedigree
Multiple biologically-related individuals with known familial relationships
Single Nucleotide Polymorphism (SNP)
A DNA sequence variation; the smallest unit of variation in the genome

Motsinger-Reif and Ritchie BioData Mining 2008 1:3   doi:10.1186/1756-0381-1-3