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A reference guide for tree analysis and visualization
Georgios A Pavlopoulos, Theodoros G Soldatos, Adriano Barbosa-Silva, Reinhard Schneider
BioData Mining 2010, 3:1 (22 February 2010)
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Research
A biclustering algorithm based on a Bicluster Enumeration Tree: application to DNA microarray data
Wassim Ayadi, Mourad Elloumi, Jin-Kao Hao
BioData Mining 2009, 2:9 (16 December 2009)
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Research
3PFDB - A database of Best Representative PSSM Profiles (BRPs) of Protein Families generated using a novel data mining approach
Khader Shameer, Paramasivam Nagarajan, Kumar Gaurav, Ramanathan Sowdhamini
BioData Mining 2009, 2:8 (4 December 2009)
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Methodology
LD-Spline: Mapping SNPs on genotyping platforms to genomic regions using patterns of linkage disequilibrium
William S Bush, Guanhua Chen, Eric S Torstenson, Marylyn D Ritchie
BioData Mining 2009, 2:7 (3 December 2009)
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Review
Extraction of pure components from overlapped signals in gas chromatography-mass spectrometry (GC-MS)
Vladimir A Liki
BioData Mining 2009, 2:6 (12 October 2009)
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Methodology
Spatially Uniform ReliefF (SURF) for computationally-efficient filtering of gene-gene interactions
Casey S Greene, Nadia M Penrod, Jeff Kiralis, Jason H Moore
BioData Mining 2009, 2:5 (22 September 2009)
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Methodology
Statistical quality assessment and outlier detection for liquid chromatography-mass spectrometry experiments
Ole Schulz-Trieglaff, Egidijus Machtejevas, Knut Reinert, Hartmut Schlüter, Joachim Thiemann, Klaus Unger
BioData Mining 2009, 2:4 (7 April 2009)
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Research
Partitioning clustering algorithms for protein sequence data sets
Sondes Fayech, Nadia Essoussi, Mohamed Limam
BioData Mining 2009, 2:3 (2 April 2009)
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Research
Multifactor dimensionality reduction analysis identifies specific nucleotide patterns promoting genetic polymorphisms
Eric Arehart, Scott Gleim, Bill White, John Hwa, Jason H Moore
BioData Mining 2009, 2:2 (30 March 2009)
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Research
Database mining for selection of SNP markers useful in admixture mapping
Tesfaye M Baye, Hemant K Tiwari, David B Allison, Rodney C Go
BioData Mining 2009, 2:1 (14 February 2009)
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Review
A survey of visualization tools for biological network analysis
Georgios A Pavlopoulos, Anna-Lynn Wegener, Reinhard Schneider
BioData Mining 2008, 1:12 (28 November 2008)
[Abstract] [Full Text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
Software article
Fast Gene Ontology based clustering for microarray experiments
Kristian Ovaska, Marko Laakso, Sampsa Hautaniemi
BioData Mining 2008, 1:11 (21 November 2008)
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Methodology
Multivariate profiling of neurodegeneration-associated changes in a subcellular compartment of neurons via image processing
Saravana K Kumarasamy, Yunshi Wang, Vignesh Viswanathan, Rachel S Kraut
BioData Mining 2008, 1:10 (14 November 2008)
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Research
Fast approximate hierarchical clustering using similarity heuristics
Meelis Kull, Jaak Vilo
BioData Mining 2008, 1:9 (22 September 2008)
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Research
Mining tissue specificity, gene connectivity and disease association to reveal a set of genes that modify the action of disease causing genes
Antonio Reverter, Aaron Ingham, Brian P Dalrymple
BioData Mining 2008, 1:8 (19 September 2008)
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Research
Search extension transforms Wiki into a relational system: A case for flavonoid metabolite database
Masanori Arita, Kazuhiro Suwa
BioData Mining 2008, 1:7 (17 September 2008)
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Review
A review of estimation of distribution algorithms in bioinformatics
Rubén Armañanzas, Iñaki Inza, Roberto Santana, Yvan Saeys, Jose Luis Flores, Jose Antonio Lozano, Yves Van de Peer, Rosa Blanco, Víctor Robles, Concha Bielza, Pedro Larrañaga
BioData Mining 2008, 1:6 (11 September 2008)
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Review
Clustering-based approaches to SAGE data mining
Haiying Wang, Huiru Zheng, Francisco Azuaje
BioData Mining 2008, 1:5 (17 July 2008)
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Methodology
Uncovering mechanisms of transcriptional regulations by systematic mining of cis regulatory elements with gene expression profiles
Qicheng Ma, Gung-Wei Chirn, Joseph D Szustakowski, Adel Bakhtiarova, Penelope A Kosinski, Daniel Kemp, Nanguneri Nirmala
BioData Mining 2008, 1:4 (17 July 2008)
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Review
Neural networks for genetic epidemiology: past, present, and future
Alison A Motsinger-Reif, Marylyn D Ritchie
BioData Mining 2008, 1:3 (17 July 2008)
[Abstract] [Full Text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
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